Course Syllabus
BIM, EMS, and BPH 288: TENTATIVE SYLLABUS
Date |
Topic |
Discussion |
Week1
|
Molecules of life |
Proteins, lipids, sugars, nucleic acids, water |
Cell By the Numbers |
How Big, How Many, How Strong, and How fast |
|
Week 2 |
Energy and the Life of Cells
|
Forces, energy, entropy, equilibria |
Week 3 |
Biological membranes |
Membrane assembly, chemical composition, mechanics, dynamics, |
Week 3 |
cytoskeleton |
Tubules, filaments, scaffolds |
Week 4 |
Physical Dynamics |
diffusion two- and three dimensions |
Week 4 |
Dynamics in crowded media |
Macromoelcular crowding: depletion forces, complex dynamics |
Week 5 (2 sessions) |
Phase Separation |
Liquid-liquid phase separation, membraneless organelles, granules |
Week 6 (2 sessions) |
Molecular Motors |
Rotary, translational, and polymerization motors |
Week 7 (2 sessions) |
Channels |
Pumps, channels, and membrane permeability |
Week 8 (2 sessions) |
Patterns in Biology |
Reaction-diffusion systems |
Week 9 |
Biofilms |
Bacterial colonies, multicellular collectives |
Week 9 |
Building a Cell |
Rotary, translational, and polymerization motors |
Week 10 |
Presentations |
Final project presentations |